PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KHN20738.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family bHLH
Protein Properties Length: 272aa    MW: 30579.7 Da    PI: 6.604
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KHN20738.1genomeTCUHKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH23.97.7e-08165212455
                 HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                 +h+ +Er RR +iN+++  L+ ++P +     k +  a +L + ++Y++sLq
  KHN20738.1 165 SHSLAERVRRGKINEKLRCLQNIVPGC----YKTMGMAVMLDEIINYVQSLQ 212
                 8*************************9....35599999**********998 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474591.57E-15159227IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000835.96E-9159216No hitNo description
Gene3DG3DSA:4.10.280.103.4E-15161220IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088814.723161211IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000104.9E-5165212IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.7E-7167217IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 272 aa     Download sequence    Send to blast
MAEFTENMQL QSNIRPSQFP FLEIDPSMEL LNQFLGMNQH VLENSNLIPM HNLVPFSCDT  60
FLGPQEPECP GNLEENFPAH VNHNALPISL PIFQAENEIH EGKKRKSMDL PETSSANSTP  120
AVSESGSKIK HSSGRGKRVK SNVTEEEKAK EVVHVRARRG QATDSHSLAE RVRRGKINEK  180
LRCLQNIVPG CYKTMGMAVM LDEIINYVQS LQHQVEFLSL KLTAASTFYD FNSETDALET  240
MQRARASEAK ELGKYKKEGY GGVSFFQPAW PL
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKT0312560.0KT031256.1 Glycine max clone HN_CCL_43 bHLH transcription factor (Glyma07g10311.1) mRNA, partial cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003528950.10.0PREDICTED: transcription factor BEE 1-like
SwissprotQ8GWK71e-64BEE3_ARATH; Transcription factor BEE 3
TrEMBLA0A0B2QLK70.0A0A0B2QLK7_GLYSO; Transcription factor BEE 3
TrEMBLK7L0K70.0K7L0K7_SOYBN; BHLH transcription factor
STRINGGLYMA07G10311.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF33603467
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G73830.11e-62BR enhanced expression 3
Publications ? help Back to Top
  1. Qi X, et al.
    Identification of a novel salt tolerance gene in wild soybean by whole-genome sequencing.
    Nat Commun, 2014. 5: p. 4340
    [PMID:25004933]